Package index • thoth

Package Overview

Package documentation and data

thoth-package thoth: thoth: Reproducible Analytics Framework with Data Version Control

example_projects: Example Analytics Project Data

decision_tracking: Decision Tracking Functions

Project Setup

Functions for creating and setting up analytics projects

create_analytics_project(): Create a New Analytics Project

check_system_requirements(): Check System Requirements

setup_docker(): Set up Docker Configuration

setup_dvc_tracking(): Set up DVC Tracking

write_gitignore(): Write Default .gitignore File

write_readme(): Write Project README

DVC Integration

Functions for tracking data and managing DVC pipelines using tidyverse-style functions

dvc_track(): Track files with DVC after writing

dvc_add(): Track Files with DVC

dvc_commit(): Commit Changes to DVC

dvc_pull(): Pull Data from DVC Remote

dvc_push(): Push Data to DVC Remote

dvc_repro(): Reproduce DVC Pipeline

dvc_status(): Check DVC Pipeline Status

write_csv_dvc(): Write a CSV file and track it with DVC

write_rds_dvc(): Write RDS with DVC tracking

dvc_stage(): Create a DVC Pipeline Stage

version_control: Version Control Functions

Git Integration

Functions for managing Git version control

git_init_repo(): Initialize a Git Repository

git_status(): Get Git Status

git_add(): Add Files to Git

git_commit(): Commit Changes to Git

git_push(): Push Changes to Git Remote

git_pull(): Pull Changes from Git Remote

git_branch(): Create a New Git Branch

git_checkout(): Checkout a Git Branch

git_branch_list(): List Git Branches

git_log(): Get Git Log

git_clone(): Clone a Git Repository

Decision Tracking

Functions for tracking human decisions in analyses

decision_tracking: Decision Tracking Functions

initialize_decision_tree(): Initialize a Decision Tree

record_decision(): Record a Decision

generate_methods_section(): Generate Methods Section from Decision Tree

export_decision_tree(): Export Decision Tree to Various Formats

Quarto Integration

Functions for customizing Quarto reports

create_quarto_template(): Create Custom Quarto Template

apply_template_to_report(): Apply Template to Report

create_template_yaml(): Create Template YAML Configuration

create_custom_css(): Create Custom CSS for Quarto Template

setup_quarto_template(): Set up Quarto Template

Metrics

Functions for model evaluation

metrics(): Calculate model performance metrics

conf_mat(): Create a confusion matrix